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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935416.1_cds_XP_016481228.1_72582
CDS Infomation

[gene=LOC107802278] [db_xref=GeneID:107802278] [protein=inner membrane protein PPF-1, chloroplastic-like] [protein_id=XP_016481228.1] [location=join(30462..30779,31546..31656,31896..31970,32394..32454,34127..34200,34285..34389,34610..34717,34816..34919,35436..35585,35659..35785,37203..37310)] [gbkey=CDS]
Sequence

ATGGCGAAAACCCTAATTTCATCGCCGTCGTTCATCGGAACTCCTTTGCCGTCGTTCTCT
CGCCATATCTTCCACCGGCGAAGGCTTATTTCAGCTAGAGTGAAATTCAGCTTCCATGAG
CTTCCTCCGATTCAATCTCTTCACTCTTCTTTCGATTTCAACGCTGTTATTAGCCGAGCC
GAAGGACTTCTCTATACGTTAGCTGATGCCGCTGTGGCTGCTGATCCTGGTGTTGCCTCC
GATGCCACTGCTGCTACTCCTCAGAAACCCGGTGGTTGGTTCGCTTTCATTTCTGACGCT
ATGGAAGTCGTTTTGAAGGTAATGAAGGATGGACTGGCAGCTGTGCATGTGCCTTATTCT
TATGGATTTGCAATCATATTGCTTACTGTCCTGGTTAAAGCTGTCACTTTCCCTTTGACA
AAGCAACAGGTTGAATCAACACTAGCAATGCAAAATCTCCAACCAAAGATCAAAGCTATT
CAGCAACGATATGCTGGAAATCAGGAAAGAATCCAACTTGAGACTTCGCGTTTATATAAG
CAGGCAGGGGTCAATCCTCTTGCTGGATGTTTTCCAACTTTGGCTACTATACCAGTTTGG
ATTGGTCTCTATCAAGCTCTCTCTAATGTGGCAAATGAGGGATTGCTGACTGAAGGTTTC
TTTTGGATTCCTTCTTTGGGAGGACCGACTACTATAGCTGCTCGACAAAGTGGATCTGGA
GTTTCTTGGCTATTCCCGTTTGTGGATGGGCATCCGCCTTTGGGTTGGCATGACACAGTG
GCTTACCTTGTTTTGCCTGTCCTGCTAATTATTTCGCAATATGTTTCAATGGAGATAATG
AAACCTCCCCAAACAGATGATCCAACTCAAAAGAACACGCTTCTGGTTTTCAAGTTCCTT
CCGCTCATGATTGGCTATTTCTCTTTGTCTGTTCCTTCAGGGTTAACAATTTACTGGTTC
ACAAATAATGTGCTGACCACGGCACAGCAAGTATGGTTGCGCAAGTTAGGTGGTGCAAAG
CCTGTTGTGAGTGGAGATGCTAGTGGTATCATCAGCGCTGGACGTGCAAAAAGAACTACC
TCTCAGTCTGAGCAAGCTGGAGAGAGATTCAGGCAGCTAAAAGAAGATGAAAAGAAGAAA
AAGTCAACCAAGGCACTCCCTACAGATAAGGTTGAAATATCAGCCTCTACATCTGATTCC
GAGGACGAAGCAGATGATGAGACCAAGCCCAAGGATGAAGAAGTTCTAGAAGAGGCTTAT
GCTTCTAGCAGTAGTAAAGAAGTTCCAAATTACTCAGGTCCAAGGAAGAGTAAAAGATCA
AAAAGGAAGCGTGCAGTATAA

Peptide Sequence

PEP ID

XP_016481228.1
PEP Infomation

PREDICTED: inner membrane protein PPF-1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAKTLISSPSFIGTPLPSFSRHIFHRRRLISARVKFSFHELPPIQSLHSSFDFNAVISRA
EGLLYTLADAAVAADPGVASDATAATPQKPGGWFAFISDAMEVVLKVMKDGLAAVHVPYS
YGFAIILLTVLVKAVTFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYK
QAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSG
VSWLFPFVDGHPPLGWHDTVAYLVLPVLLIISQYVSMEIMKPPQTDDPTQKNTLLVFKFL
PLMIGYFSLSVPSGLTIYWFTNNVLTTAQQVWLRKLGGAKPVVSGDASGIISAGRAKRTT
SQSEQAGERFRQLKEDEKKKKSTKALPTDKVEISASTSDSEDEADDETKPKDEEVLEEAY
ASSSSKEVPNYSGPRKSKRSKRKRAV

Transcript Sequence

Gene sequence data has not been registered.